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	<title>Chemistry Blog &#187; SciFinder</title>
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		<title>Throwing Down the Gauntlet for my Fellow Geeks</title>
		<link>http://www.chemistry-blog.com/2009/02/03/1152/</link>
		<comments>http://www.chemistry-blog.com/2009/02/03/1152/#comments</comments>
		<pubDate>Tue, 03 Feb 2009 17:03:29 +0000</pubDate>
		<dc:creator>Jeremy</dc:creator>
				<category><![CDATA[Uncategorized]]></category>
		<category><![CDATA[ACS]]></category>
		<category><![CDATA[Dan Carlin]]></category>
		<category><![CDATA[Doug Taber]]></category>
		<category><![CDATA[Google]]></category>
		<category><![CDATA[SciFinder]]></category>
		<category><![CDATA[Wikipedia]]></category>

		<guid isPermaLink="false">http://www.chemistry-blog.com/2009/02/03/1152/</guid>
		<description><![CDATA[I love Wikipedia.  I think deep down we all do.  There’s something truly amazing about accessing hordes of (useless) information simply by entering a few keystrokes in a giant search engine.  At times, Wikipedia’s better than “Googling” simply by virtue of the fact that each topic is referenced (most of the time) and peer-reviewed.  By [...]]]></description>
			<content:encoded><![CDATA[<p><!--StartFragment--></p>
<p class="MsoNormal">I love Wikipedia.<span>  </span>I think deep down we all do.<span>  </span>There’s something truly amazing about accessing hordes of (useless) information simply by entering a few keystrokes in a giant search engine.<span>  </span>At times, Wikipedia’s better than “Googling” simply by virtue of the fact that each topic is referenced (most of the time) and peer-reviewed.<span>  </span>By analogy, can you imagine the quality of published work if the ACS didn’t require references in a submitted manuscript or operate a peer-reviews-type system?<span>  </span></p>
<p class="MsoNormal">Wikipedia is great for getting an objective “big picture,” rapidly in a fairly organized format, but it has its limitations.  Do you need to know the origins of Evacuation day in Boston?<span>  </span>Use Wikipedia.<span>  </span>Do you need to know the economic impact of the 11-month British seizure of Boston?<span>  </span>You’re better off consulting a textbook or bugging you local history scholar.<span>  </span></p>
<p class="MsoNormal">By contrast, my “ranking” professors largely despise search engines such as Wikipedia.<span>  </span>I think they frown at the ease of accessing a tool that anyone can alter for finding physical constants (i.e. the density of aniline) or understanding conceptual material (i.e. Zimmerman-Traxler transition state models).<span>  </span>I once heard a professor claim, “If it’s published on the internet, there’s really no way to verify if the information is true.”<span>  </span>In a sense, he was correct.<span>  </span>The internet is a terrific source for (mis)information, and Wikipedia is really no exception to this phenomenon.<span>  </span>Hell, my wife (trained as a chemical engineer) has witnessed physical constants change on Wikipedia on several occasions.<span>  </span></p>
<p class="MsoNormal">Science is a largely unspoken art.<span>  </span>Sure, there are lectures and textbooks that “guide the way.”<span>  </span>However, every research scientist mines information from the stockpiles of primary literature in an effort to piece together relevant aspects of his or her project.<span>  </span>I imagine that if I were to search for a procedure for using SOCl<sub>2</sub> today (Lord knows I wouldn’t consult my PI), there are probably 49 other people in the world this week looking for a similar procedure.<span>  </span>This means that 50 of us will spend valuable time crawling through the literature looking for a similar ballpark procedure.<span>  </span>To make matters worse, on my campus, the SciFinder subscription is only available at a library where waiting for a computer is akin waiting for the <a href="http://answers.yahoo.com/question/index?qid=20090123221452AAUvNVw">Kansas City Royals to win a World Series</a>.<span>  </span>A lot of these problems could be fixed with the development of a free scientific database.</p>
<p class="MsoNormal">I think charging several hundreds of dollars for crappy textbooks is criminal.<span>  </span>I also think that a scientist’s time is too valuable to be wasted crawling through primary literature looking for the proverbial needle in a haystack.<span>  </span>Knowledge should be available to the general public, hence libraries.<span>  </span>But, we live in a digital age where copious and sufficient information can be accessed with the click of a mouse.<span>  </span>Don’t get me wrong.<span>  </span>I believe in peer-reviewed publishing.<span>  </span>However, the organization of that information (specifically scientific) is what kills me.<span>  </span></p>
<p class="MsoNormal">I propose the creation of a knowledge database.<span>  </span>In the spirit of <a href="http://www.dancarlin.com/disp.php?page=csarchive">Dan Carlin’s last podcast</a>, I say let it be produced by the militia—by the people for the people.<span>  </span>You sign on.<span>  </span>You contribute.<span>  </span>You enter the associated references.<span>  </span>Do you need to know the side reactions of a Pictet Spengler reaction?<span>  </span>Maybe someone in <a href="http://www.chemistry.manchester.ac.uk/aboutus/staff/showprofile.php?id=24">Patrick Bailey’s group</a> just added a reference from a recent paper last week.<span>  </span>Need a technique for depositing silver nanoparticles?<span>  </span>That would be easy to find if someone in <a href="http://www.columbia.edu/cu/chemistry/fac-bios/brus/group/index.html">Louis Brus’ team</a> contributed a procedure.<span>  </span>Earlier this morning, a friend of mine just came by my office looking for a quick, easy way to make trityl tetrafluoroborate.<span>  </span>Imagine how easy it would’ve been for him to access a free database that references 50 different procedures (BTW, his group has complete access to SciFinder outside of the library).<span>  </span>Don’t feel left out you biologists out in Internet-land.<span>  </span>You could have access to PCR techniques, free sequencing software, and even references to protein crystal structures.</p>
<p class="MsoNormal">My argument is this: there is so much useful information that needs to be organized in a format that is free, navigational and easy to access.<span>  </span>One person cannot do it alone; we all need to contribute for the betterment of science, in general.<span>  </span>I envision a hybrid of Doug Taber’s <a href="http://www.organic-chemistry.org/">Organic Chemistry Portal</a>, Wikipedia and a condensed version of SciFinder.<span>  </span>I’ll gladly contribute!<span>  </span>How do we get the ball rolling?</p>
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		<slash:comments>25</slash:comments>
		</item>
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		<title>SciFinder Youtube Videos</title>
		<link>http://www.chemistry-blog.com/2009/01/16/scifinder-youtube-videos/</link>
		<comments>http://www.chemistry-blog.com/2009/01/16/scifinder-youtube-videos/#comments</comments>
		<pubDate>Fri, 16 Jan 2009 10:28:04 +0000</pubDate>
		<dc:creator>mitch</dc:creator>
				<category><![CDATA[Uncategorized]]></category>
		<category><![CDATA[CAS]]></category>
		<category><![CDATA[SciFinder]]></category>
		<category><![CDATA[YouTube]]></category>

		<guid isPermaLink="false">http://www.chemistry-blog.com/?p=895</guid>
		<description><![CDATA[This is wrong. This is so wrong. But it did get me to bookmark the website. The Paper The Party The cheese is strong with this one. Update: Also covered by Will. SciFinder on YouTube? Absurd. Mitch]]></description>
			<content:encoded><![CDATA[<p>This is wrong. This is so wrong. But it did get me to bookmark the website.</p>
<p><strong>The Paper</strong><br />
<object width="480" height="295"><param name="movie" value="http://www.youtube.com/v/AEUXJ7ydpKI&#038;hl=en&#038;fs=1"></param><param name="allowFullScreen" value="true"></param><param name="allowscriptaccess" value="always"></param><embed src="http://www.youtube.com/v/AEUXJ7ydpKI&#038;hl=en&#038;fs=1" type="application/x-shockwave-flash" allowscriptaccess="always" allowfullscreen="true" width="480" height="295"></embed></object></p>
<p><strong>The Party</strong><br />
<object width="480" height="295"><param name="movie" value="http://www.youtube.com/v/4_WoAR9GdCQ&#038;hl=en&#038;fs=1"></param><param name="allowFullScreen" value="true"></param><param name="allowscriptaccess" value="always"></param><embed src="http://www.youtube.com/v/4_WoAR9GdCQ&#038;hl=en&#038;fs=1" type="application/x-shockwave-flash" allowscriptaccess="always" allowfullscreen="true" width="480" height="295"></embed></object></p>
<p>The cheese is strong with this one.</p>
<p>Update: Also covered by Will. <a href="http://www.willandbeyond.com/news/2008-11-14-scifinder-on-youtube-absurd.php">SciFinder on YouTube? Absurd.</a></p>
<p>Mitch</p>
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		<slash:comments>9</slash:comments>
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